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An Analysis Pipeline and its Application on the Cucurbita pepo Genome: An Automated Analysis Pipeline for Next Generation Sequencing Data - Softcover
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First insights into the genome of Cucurbita pepo are presented in this thesis. 15.67 percent of the 2,349,855 sequence reads generated with Roche’s 454 Pryosequencer received a classification in preprocessing. Of the remaining sequence reads 38.82% were classified as repeats, 11.08 percent as gene coding region, 7.08 percent as chloroplast and 5.39 percent as mitochondrial sequences. A comparison with the genome of cucumber reinforces this distribution. Moreover, this thesis describes an automated analysis pipeline for genome analyses. It is equipped with a set of newly developed components to perform whole genome analyses with next generation sequencing datasets, to store the obtained results into a database and to visualize them on a web interface. Comparisons with state of the art analysis pipelines show that its visualization capabilities and automatic input checker are rare but very helpful features.
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First insights into the genome of Cucurbita pepo are presented in this thesis. 15.67 percent of the 2,349,855 sequence reads generated with Roche's 454 Pryosequencer received a classification in preprocessing. Of the remaining sequence reads 38.82% were classified as repeats, 11.08 percent as gene coding region, 7.08 percent as chloroplast and 5.39 percent as mitochondrial sequences. A comparison with the genome of cucumber reinforces this distribution. Moreover, this thesis describes an automated analysis pipeline for genome analyses. It is equipped with a set of newly developed components to perform whole genome analyses with next generation sequencing datasets, to store the obtained results into a database and to visualize them on a web interface. Comparisons with state of the art analysis pipelines show that its visualization capabilities and automatic input checker are rare but very helpful features.
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Education:2000-2005 High School, Department of Industrial Engineering, Höhere Technische Lehranstalt Vöcklabruck. 2006-2009 Bioinformatics, Bachelor Studies, University of Applied Sciences Hagenberg. 2009-2011 Biomedical Informatics, Master Studies, University of Applied Sciences Hagenberg.
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An Analysis Pipeline and its Application on the Cucurbita pepo Genome
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Zustand: New. Dieser Artikel ist ein Print on Demand Artikel und wird nach Ihrer Bestellung fuer Sie gedruckt. Autor/Autorin: Schobesberger RichardEducation:2000-2005 High School, Department of Industrial Engineering, Hoehere Technische Lehranstalt Voecklabruck. 2006-2009 Bioinformatics, Bachelor Studies, University of Applied Sciences Hagenberg. 2009-2011 Bi. Bestandsnummer des Verkäufers 4983456
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An Analysis Pipeline and its Application on the Cucurbita pepo Genome
Verlag:
AV Akademikerverlag Apr 2012, 2012
ISBN 10: 3639392221
ISBN 13: 9783639392227
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Taschenbuch. Zustand: Neu. Neuware -First insights into the genome of Cucurbita pepo are presented in this thesis. 15.67 percent of the 2,349,855 sequence reads generated with Roche¿s 454 Pryosequencer received a classification in preprocessing. Of the remaining sequence reads 38.82% were classified as repeats, 11.08 percent as gene coding region, 7.08 percent as chloroplast and 5.39 percent as mitochondrial sequences. A comparison with the genome of cucumber reinforces this distribution. Moreover, this thesis describes an automated analysis pipeline for genome analyses. It is equipped with a set of newly developed components to perform whole genome analyses with next generation sequencing datasets, to store the obtained results into a database and to visualize them on a web interface. Comparisons with state of the art analysis pipelines show that its visualization capabilities and automatic input checker are rare but very helpful features.VDM Verlag, Dudweiler Landstraße 99, 66123 Saarbrücken 76 pp. Englisch. Bestandsnummer des Verkäufers 9783639392227
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An Analysis Pipeline and its Application on the Cucurbita pepo Genome : An Automated Analysis Pipeline for Next Generation Sequencing Data
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Taschenbuch. Zustand: Neu. nach der Bestellung gedruckt Neuware - Printed after ordering - First insights into the genome of Cucurbita pepo are presented in this thesis. 15.67 percent of the 2,349,855 sequence reads generated with Roche s 454 Pryosequencer received a classification in preprocessing. Of the remaining sequence reads 38.82% were classified as repeats, 11.08 percent as gene coding region, 7.08 percent as chloroplast and 5.39 percent as mitochondrial sequences. A comparison with the genome of cucumber reinforces this distribution. Moreover, this thesis describes an automated analysis pipeline for genome analyses. It is equipped with a set of newly developed components to perform whole genome analyses with next generation sequencing datasets, to store the obtained results into a database and to visualize them on a web interface. Comparisons with state of the art analysis pipelines show that its visualization capabilities and automatic input checker are rare but very helpful features. Bestandsnummer des Verkäufers 9783639392227
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An Analysis Pipeline and its Application on the Cucurbita pepo Genome
Verlag:
AV Akademikerverlag Apr 2012, 2012
ISBN 10: 3639392221
ISBN 13: 9783639392227
Neu
Taschenbuch
Anbieter: BuchWeltWeit Ludwig Meier e.K., Bergisch Gladbach, Deutschland
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Taschenbuch. Zustand: Neu. This item is printed on demand - it takes 3-4 days longer - Neuware -First insights into the genome of Cucurbita pepo are presented in this thesis. 15.67 percent of the 2,349,855 sequence reads generated with Roche s 454 Pryosequencer received a classification in preprocessing. Of the remaining sequence reads 38.82% were classified as repeats, 11.08 percent as gene coding region, 7.08 percent as chloroplast and 5.39 percent as mitochondrial sequences. A comparison with the genome of cucumber reinforces this distribution. Moreover, this thesis describes an automated analysis pipeline for genome analyses. It is equipped with a set of newly developed components to perform whole genome analyses with next generation sequencing datasets, to store the obtained results into a database and to visualize them on a web interface. Comparisons with state of the art analysis pipelines show that its visualization capabilities and automatic input checker are rare but very helpful features. 76 pp. Englisch. Bestandsnummer des Verkäufers 9783639392227
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An Analysis Pipeline and its Application on the Cucurbita.
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An Analysis Pipeline and its Application on the Cucurbita.
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An Analysis Pipeline and its Application on the Cucurbita.
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